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Snakemake diagram

Snakemake diagram

The following diagram is the overall steps that have to be run by snakemake to generate the example data.

Diagram

Note that in this case, the KARI data had three subsets defined, so create_subsets and all of the other steps downstream from this step are run three times, while the ALS data only has one subset defined and so create_subsets is only run once.

snakemake directed acyclic graph